Publications

Listed below is a selection of recent publications from the Aitchison Lab. See a full list on PubMed.

ESCRT-III is required for scissioning new peroxisomes from the endoplasmic reticulum. Mast FD, Herricks T, Strehler KM, Miller LR, Saleem RA, Rachubinski RA, Aitchison JD. J Cell Biol. 2018 Jun 4;217(6):2087-2102 

Involvement in surface antigen expression by a moonlighting FG-repeat nucleoporin in trypanosomes. Holden JM, Koreny L, Obado S,… Aitchison JD, Rout MP, Field MC. Mol Biol Cell. 2018 May 1;29(9):1100-1110.  

Integrative structure and functional anatomy of a nuclear pore complex. Seung Joong Kim, Javier Fernandez-Martinez, Ilona Nudelman …John Aitchison et al. Nature. 2018 Mar 22;555(7697):475-482

The promise of systems biology approaches for revealing host pathogen interactions in malaria. Zuck M, Austin LS, Danziger SA, Aitchison JD, Kaushansky A. Front Microbiol. 2017 Nov 16;8:2183. 

Linking EPCR-binding PfEMP1 to brain swelling in pediatric cerebral malaria. Kessler A, Dankwa S, Bernabeu M, Harawa V, Danziger SA, Duffy F … Sather DN, Aitchison JD, Taylor TE, Seydel KB, Smith JD, Kim K. Cell Host Microbe.2017 Nov 8;22(5):601-614.e5.  

ODELAY: a large-scale method for multi-parameter quantification of yeast growth. Herricks T, Mast FD, Li S, Aitchison JD. J Vis Exp. 2017 Jul 3;(125). 

An indicator cell assay for blood-based diagnostics. Danziger SA, Miller LR, Singh K, Whitney GA, Peskind ER, Li G, Lipshutz RJ, Aitchison JD, Smith JJ. PLoS One. 2017 Jun 8;12(6):e0178608. PLoS One. 2017 Jun 8;12(6):e0178608  

Adaptive prediction emerges over short evolutionary time scales. López García de Lomana A, Kaur A, Turkarslan S, Beer KD, Mast FD, Smith JJ, Aitchison JD, Baliga NS. Genome Biol Evol. 2017 Jun 1;9(6):1616-1623.

Combining inferred regulatory and reconstructed metabolic networks enhances phenotype prediction in yeast. Wang Z, Danziger SA, Heavner BD, Ma S, Smith JJ, Li S, Herricks T, Simeonidis E, Baliga NS, Aitchison JD, Price ND. PLoS Comput Biol. 2017 May 17;13(5):e1005489

One-Cell Doubling Evaluation by Living Arrays of Yeast, ODELAY! Herricks T, Dilworth DJ, Mast FD, Li S, Smith JJ, Ratushny AV, Aitchison JD. G3 (Bethesda). 2017 Jan 5;7(1):279-288.